Enable Numerous Variables In Significance Analysis of Gene Expression


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Documentation for package ‘Envisage’ version 1.0-2

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alias.glmNA Find Aliases (Dependencies) in a Model
class:glmNA Class for Envisage Analysis
coef.glmNA Extract Model Coefficients
corParams Flag highly correlated parameters
dataTransform Gene expression data formatting for Envisage
envisage Enables Numerous Variables In Significant Analysis of Gene Expression
GS2BC Convertor for GeneSpring GSint and Bioconductor ExpressionSet objects
INTlevels Calculate the total number of levels within a model for package Envisage
labelParams Remove labelling variables
modelCalcINT Fit a model with main effect and first order interaction terms for each gene and calculate significance
modelCalcME Fit a model with main effect terms only for each gene and calculate significance
modelEntry Specify a minimum model for step-wise model fitting
mulTestCor Multiple testing corrections for package Envisage
result.output Output significant genes for package Envisage
SkinvsPancreas Comparison of Gene Expression in Skin and Pancreas